Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015914308.1_cds_XP_016464321.1_57371
CDS Infomation

[gene=LOC107787287] [db_xref=GeneID:107787287] [protein=monocopper oxidase-like protein SKU5] [protein_id=XP_016464321.1] [location=join(84924..85317,91582..91643,93028..93143,93251..93521,93819..93951,94044..94413,94496..94864,95176..95432,95524..95588)] [gbkey=CDS]
Sequence

ATGAGATTTTGGAAGAAGGGGAAGCTTAGTCCCCGCTATATTGGTCCATATAGAATCCTA
CGAACGATCAAACAGGTGGCTTATGAGTTAGAATTGCCACAAGAACTAGTTGTTGTACAC
CCATTGTTTCATGTGTCCATGTTGAAGAAATTCATGGGAGACCCGTCACGTGTGGTTCCT
ACAGAGATTATAGGGGTTAAAGACAGCCGGTCTTACGAAGAAATTCCAGTGGCTATTCTT
GATCGCCAAATCCGCAAGCTCAGAACTAAGGAAATTGCTTCAGTAAAAGTTCTTTGGAGG
AATCAAAAGGTTGAAGAGGCTACATGGGAAGCCGAGGAGGACATGAAGTCCAGATATCCC
TATCTCTTTGAAGAGCAAAAGGAAAATTTGGAAGTTAGTCCTGAAGTGGCTCTTATAGCG
TTGCTTCGTTCCAAGTACGCTGCTTATGTTATGAAGCTACAGGTTATCACTATCAATGGG
ATGTTTCCAGGACCATTGATCAATGCGACGACTAATGATATTGTAAATGTGAATGTCTTC
AATAACATGGATGAATCCTTGCTTATAACATGGAATGGCATCCAACAGAGGCTAAATTCA
TGGCAAGATGGAGTTTCAGGCACAAACTGTGCGATTGAACCTGGAACAAACTGGACATAT
GTGTTTCAGGCTAAGGACCAAATTGGAACTTTCACCTACTTCCCTTCAATCAACTTTCAG
AAGGTTGCTGGAGGATATGGACCAATTCGAGTCAATAATCGCAACGTCATAGCTGTTCCA
TTCCCAAAACCAGAAGCTGAGTTTGATCTCCTGATTGGCGACTGGTTCAGTACTGATTAC
AAGTCTCTTAGGTCCTCTGTACAAGACAGGGAATCTAGTCAGCTCTTCGATGTCCCTGAT
GCAATCCTGATGAATGGTAAAGGACCATACGAGCTTTCAATTTCGAAGGGACGTGAGTCT
TTTACCGTATCAAAAGGGATGACTTACAGATTCAGGATATCAAATGTTGGAACTGTCATG
AGTTTTAACTTCAGAATTCAAAACCACAAGATAGTCTTGGTTGAGACAGAAGGGTCTTAC
ACTAATCAGATAACACTTGACTCTCTCGATGTGCACGTTGGCCAATCGTATTCTGTTCTC
GTTACTGCTGATCAAAATGAAGCTGATTATTTCATGGTAGCAAATCCTAAAATGTACAAA
AGTAATGAATCTAGTGATAGCAAATCTCTTGAAGGAATAGGGATCCTGCACTATGCCAAT
TCTTTAACAACAGTTAGTGGTCCTCTCCCTTCCGGCCCTGATCCATTTGATATCGAATTT
TCTGTCAATCAAGCCAAATCTATCACGTGGAACCTGACAACTGGAGCTGCAAGGCCTAAT
CCACAAGGAACATTCAATGTATCAAATGTGACATTGACCCAAACCTTTATCCTTCATGGT
TCAAAGGGTGAAATTAATGGTTGGCCGCGATATGTAGTCAACAACGTATCCTATCTCACA
CCAGAGACACCATTAAAACTTGCTGATTACTTTGTGAATGGATCTGGTGTCTACCAATTA
GATCGATTTCCCACTCACTCAGTGAATGACGCTGCAGCTTATGGAGTTTCTGTTGTGTCT
GGAATCCACAAAGGGTGGCTAGAAATCGTCTTCAAAAATGATCTTGATGTTATGGATTCT
TGGCATTTGGATGGTTTCGGATTCTATGTTGTAGGATTTGGGAATGGAGATTGGACACCA
GCAGCTCGTGAAACGTACAACATCTTCGATCCTGTTGTTCGTTCCACTGTCCAAGTTTAC
CCTGGAAGATGGACAGCAGTATATGTTTTTCTTGACAATCCTGGAATGTGGAACTTGAGA
TCACAGCACTTAAAGAATTGGTACTTAGGACAAGAACTTTTTATTAGAGTTTTCGACGAT
AATCCTAACCCTGCTAAGGAGAGACAACCACCTCAAAACCTTCTTTTGTGTGGGATGTTT
GAAAGTTCTCTTTCACCTGTTCCAAGTCCAGCTCCAGCTCCCCAAGCAGGATGGTGA

Peptide Sequence

PEP ID

XP_016464321.1
PEP Infomation

PREDICTED: monocopper oxidase-like protein SKU5 [Nicotiana tabacum]
Sequence

MRFWKKGKLSPRYIGPYRILRTIKQVAYELELPQELVVVHPLFHVSMLKKFMGDPSRVVP
TEIIGVKDSRSYEEIPVAILDRQIRKLRTKEIASVKVLWRNQKVEEATWEAEEDMKSRYP
YLFEEQKENLEVSPEVALIALLRSKYAAYVMKLQVITINGMFPGPLINATTNDIVNVNVF
NNMDESLLITWNGIQQRLNSWQDGVSGTNCAIEPGTNWTYVFQAKDQIGTFTYFPSINFQ
KVAGGYGPIRVNNRNVIAVPFPKPEAEFDLLIGDWFSTDYKSLRSSVQDRESSQLFDVPD
AILMNGKGPYELSISKGRESFTVSKGMTYRFRISNVGTVMSFNFRIQNHKIVLVETEGSY
TNQITLDSLDVHVGQSYSVLVTADQNEADYFMVANPKMYKSNESSDSKSLEGIGILHYAN
SLTTVSGPLPSGPDPFDIEFSVNQAKSITWNLTTGAARPNPQGTFNVSNVTLTQTFILHG
SKGEINGWPRYVVNNVSYLTPETPLKLADYFVNGSGVYQLDRFPTHSVNDAAAYGVSVVS
GIHKGWLEIVFKNDLDVMDSWHLDGFGFYVVGFGNGDWTPAARETYNIFDPVVRSTVQVY
PGRWTAVYVFLDNPGMWNLRSQHLKNWYLGQELFIRVFDDNPNPAKERQPPQNLLLCGMF
ESSLSPVPSPAPAPQAGW

Transcript Sequence

Gene sequence data has not been registered.